Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015891365.1_cds_XP_016446165.1_41047
CDS Infomation

[gene=LOC107771328] [db_xref=GeneID:107771328] [protein=TMV resistance protein N-like] [protein_id=XP_016446165.1] [location=join(14..364,519..1643,2258..3790)] [gbkey=CDS]
Sequence

ATGACTTGTCCTTTGCGCTCTGTTAATGCAATTTTTGAATCCTCTCAGGGCGGAGAAGCA
ATAGAAGTCATATTAATCCCGTTGATGTCCAGCTCAGAGGAGAATACCATTCACCTGAGC
AATGAAGTCTTCAGACATATGAAGCGACTAAGAATATTTGTATCATCATCTCACAAGAAC
GTCATGTATTTTTGCTCTCATGACCCCATTAAGTTTCTTCCTAACAGCTTATGCTGGATT
AATTGGTCATATTATCCTTCACCATCATTGCCAGAAAATTTTGAACCACCAAAGCTGGTG
GGGCTTATTATGCATTGCAGTTACGTGGTTAACCTCTGGAAGGGGTCAAAGCATTTAAAC
AGGTTGAGTATTCTTGATTTGAGTGATTCTCGAAAATTAATCCAAATTTCAGACCTTTCC
GGGTCTCCAAATTTGGAGAGGCTAATCCTATGTCACTGTGTTCGGCTGGTAGAGGTCCAC
CCATCTGTTGGAGCCCTCAAAAAGCTTACTATTTTAGATGTGGAAGGTTGTGAAAAACTT
GAAAGGCTTCCCTCTAAGTTTCAATCCGGGTCTCTTGAAGTTCTAAATTTTTCTGGTTGT
CGGAGTTTGAGAAAAGTTCCAGACATTCAGCAAAATGTGAATCGTTTAACAGAATTCAAG
AAGCCAAACTTTGGGGTACTTGAATTAACATCATCATTCCTGAGCTATCTAGATTTGAGT
GGCTGCAGTAACATTGAAACGCTCCCTAGCAGCATGTGCAGGTTGAAAAATTTGAAGTAT
CTTTACCTCAATCGCTGTACCAAACTAAAGAACTTGCCAGAAGATATTTGTGAACTAGTG
AACTTGGAGGGGCTTGATGCGAGTGAAACATCAGTTTGGTGCACCCCAAATTCCATCACA
TGCTTGAGGAAACTGAAGTACCTATCTTTTCGGAAAGTACCCAAGGCTTTTCATTTGAGC
GATTTATGCAGTTGGGGATGTTTTGCCCAACTTGATTTGAAGTTTCAGCTGCCCAGCACT
TTATCAGTCTTTTGCACACTTATAAGACTGGATCTCAGTGCTTGCAATTTGTTTGATGGC
AGTATTCCTGAGGATCTTGGATGCTTGGCCTCACTACTAGAGTTAAACCTGAGCAGAAAT
AACTTCACCTTTTTACCTAAAAGCATTGTGCTACTTAACCGCCTTCGACACCTTGACATA
ACCTATTGTGAAAAGCTAACAGAGCTGCCAGAGCTTCCTCCACGTATAATGAAACTGTTT
CTAGACGATCGCTTTGCTTTGGAAAGCATTCCAACACTACCAACCATGTACAAAGAGTTG
TACTTGGTCTCATTCGCTAATCAGAAGTTGCAAGAGATGTGGTGTGCTTCACGCAGGGAA
AGTTCTGGTGCAAAGATGAGAAACTGTATAAGGAAGAACATGACGGATATGCTAGAACAG
ATTCTCCTTCCATTTTTGTCAATAGTGCAGCTTAAGTTGGTTTTTGACGACCAGCGCAGA
GGGGGGAGATTTGGTATTGTCTTCCCTAGAAGTGATCCAAGTGCTAAGGTTCCTAGGTGG
TTCAAGTATCGTAAGACATGTTCAACGAGGATTTCCTTCAACCTGAAGAGACACTGGTAT
AATAATAAGTTTATGGGATTTGCTATCTATTGTCAGCTTCCTTTCTTAAATGACGAATCA
CCGAAAAACCGTAATAGGCAGTTTGCATTCAGTTTGCTATGGGGTGCAACAATCACTACA
AAATTGGTGCCAGGACGTACTGCTATGGATCAACAAACTCCTGCAAAAATAGTTCATTTG
CAAGTGTCAAATGTAGTAGCATATGGCAGTCATGACTGCTTTATTTTCTTACAATTGGAC
CTAAGAAAGTTACATTTTAATGGTAAAGGTAAGGGCACAATGTTGATAGATAATCCAAAT
GACTATTGTAGATTTGAGGCATCTCTAGATTGTCGTATGTCATCAAATTGGGGAGTTCGT
CTGGTATATGCTGATGATATTGAGGTGATGAGGTTGGAATGGGCTTGGCAGTCTAACAGA
TTTGAGCTTGAGCATTTGCATGAAGAGGATCTCGAGTTGTGTACTGGGAGGTTGAAAGAA
TTGTCAGTCCCAGGGGAAATAAGATATTTTTATGCAACACTTATTTTCTATGAATTGCCA
GTTCTATCGACTTGCCCGAGATGCTTATCCTTTGCTGAAGACTTGACCCACGTATTCTTG
AACTGTAAATACTCTCAGCTAGTCTGGGAAGGATCAAGATTGGGCCTAAACTTTAAAGTT
GGGACCCCAGTTGAATTTCAAGAGTGGTTACTTAAGTGGACTTTGTCAGCTCCTGAAAAT
GAAGATTTCAGTTTTTCGTTAGCTGTCCTATGGGCGATCTGGAAGCACAGAAACAAGTTA
GTGCATGAAAGAGCTGTTTTTGTTCCCTCAGAAGTCATTTCCACTGCCATTAAAGAGCAC
TCAAGGTTTCCGTATTCTGTTGGCATAGCAATAAGAGAGCTCTATGAGGTGCATAGAGGA
ACAATTGTCGATGTCAATGCTTTCAACGTTGATTCTGATGTACAGCTGGACGACAACGTA
CTAGTAATGGAGGTTAAGGGAGCTTGGAAAGAGGGACAAGAATGGGCTGGAATGGCATGG
GTAGCTTATCGGTGGAACTCTGGGGTTAAAGTGGCTGAGGCTAGAAGATCGTTGAAGGTC
AGGAGCAAACTACATGCAGAAGTACATGCCTTTGAGCATGCAGTGAAATGGTCCCTCGTC
ATAGATTCTCCAATCGTAATTTTTTCTGATAACCAGATCTTGATTAAGGAACTCCATAAT
TCAGATTGCTGTTCAGATCAAGACATTGTCTGTATGTTGCATGAATGTCTGGAATTCATG
GAAGCAAATGAAATATCCTGGAAAGTTGTCAAAGTTGCAAGTTATGCAGTATCAGCTGCA
AAGAGAGCAGCAAAAATGGCCATGAAGACTCACATGGATGTATTGATCTGGGATCCTATT
GACATTTAA

Peptide Sequence

PEP ID

XP_016446165.1
PEP Infomation

PREDICTED: TMV resistance protein N-like [Nicotiana tabacum]
Sequence

MTCPLRSVNAIFESSQGGEAIEVILIPLMSSSEENTIHLSNEVFRHMKRLRIFVSSSHKN
VMYFCSHDPIKFLPNSLCWINWSYYPSPSLPENFEPPKLVGLIMHCSYVVNLWKGSKHLN
RLSILDLSDSRKLIQISDLSGSPNLERLILCHCVRLVEVHPSVGALKKLTILDVEGCEKL
ERLPSKFQSGSLEVLNFSGCRSLRKVPDIQQNVNRLTEFKKPNFGVLELTSSFLSYLDLS
GCSNIETLPSSMCRLKNLKYLYLNRCTKLKNLPEDICELVNLEGLDASETSVWCTPNSIT
CLRKLKYLSFRKVPKAFHLSDLCSWGCFAQLDLKFQLPSTLSVFCTLIRLDLSACNLFDG
SIPEDLGCLASLLELNLSRNNFTFLPKSIVLLNRLRHLDITYCEKLTELPELPPRIMKLF
LDDRFALESIPTLPTMYKELYLVSFANQKLQEMWCASRRESSGAKMRNCIRKNMTDMLEQ
ILLPFLSIVQLKLVFDDQRRGGRFGIVFPRSDPSAKVPRWFKYRKTCSTRISFNLKRHWY
NNKFMGFAIYCQLPFLNDESPKNRNRQFAFSLLWGATITTKLVPGRTAMDQQTPAKIVHL
QVSNVVAYGSHDCFIFLQLDLRKLHFNGKGKGTMLIDNPNDYCRFEASLDCRMSSNWGVR
LVYADDIEVMRLEWAWQSNRFELEHLHEEDLELCTGRLKELSVPGEIRYFYATLIFYELP
VLSTCPRCLSFAEDLTHVFLNCKYSQLVWEGSRLGLNFKVGTPVEFQEWLLKWTLSAPEN
EDFSFSLAVLWAIWKHRNKLVHERAVFVPSEVISTAIKEHSRFPYSVGIAIRELYEVHRG
TIVDVNAFNVDSDVQLDDNVLVMEVKGAWKEGQEWAGMAWVAYRWNSGVKVAEARRSLKV
RSKLHAEVHAFEHAVKWSLVIDSPIVIFSDNQILIKELHNSDCCSDQDIVCMLHECLEFM
EANEISWKVVKVASYAVSAAKRAAKMAMKTHMDVLIWDPIDI

Transcript Sequence

Gene sequence data has not been registered.